An assortment of projects that I have or am working on, primarily in bioinformatics

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Transposable Elements

Annotating transposable elements using a sample sequencing approach and a custom pipeline to look for patterns in genome size evolution.

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Erycina and CAM

Finding the master regulators of CAM photosynthesis in orchids using a transcriptomics and clustering approach.

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Small RNA Cross-Talk

Revealing the phenomenon of small RNA communication between cross-kingdom species.

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Additional

  • Intro to Bioinformatics Curriculum (Lecture + Lab)

Smaller Projects

  • Regulatory rewiring in the Ftz-F1 gene
  • A hierarchical analysis of the clinical, genetic, and imaging data for Alzheimer’s Disease